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   LOCUS       NC_000907            1830138 bp    DNA     circular BCT 14-AUG-2007
   DEFINITION  Haemophilus influenzae Rd KW20, complete genome.
   ACCESSION   NC_000907
   VERSION     NC_000907.1  GI:16271976
   KEYWORDS    .
   SOURCE      Haemophilus influenzae Rd KW20
     ORGANISM  Haemophilus influenzae Rd KW20
               Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
               Pasteurellaceae; Haemophilus.
   REFERENCE   1  (bases 1 to 1830138)
     AUTHORS   Langen,H., Takacs,B., Evers,S., Berndt,P., Lahm,H.W., Wipf,B.,
               Gray,C. and Fountoulakis,M.
     TITLE     Two-dimensional map of the proteome of Haemophilus influenzae
     JOURNAL   Electrophoresis 21 (2), 411-429 (2000)
      PUBMED   10675023
   REFERENCE   2  (bases 1 to 1830138)
     AUTHORS   Fountoulakis,M., Juranville,J.F., Roder,D., Evers,S., Berndt,P. and
               Langen,H.
     TITLE     Reference map of the low molecular mass proteins of Haemophilus
               influenzae
     JOURNAL   Electrophoresis 19 (10), 1819-1827 (1998)
      PUBMED   9719565
   REFERENCE   3  (bases 1 to 1830138)
     AUTHORS   Tatusov,R.L., Mushegian,A.R., Bork,P., Brown,N.P., Hayes,W.S.,
               Borodovsky,M., Rudd,K.E. and Koonin,E.V.
     TITLE     Metabolism and evolution of Haemophilus influenzae deduced from a
               whole-genome comparison with Escherichia coli
     JOURNAL   Curr. Biol. 6 (3), 279-291 (1996)
      PUBMED   8805245
   REFERENCE   4  (bases 1 to 1830138)
     AUTHORS   Smith,H.O., Tomb,J.F., Dougherty,B.A., Fleischmann,R.D. and
               Venter,J.C.
     TITLE     Frequency and distribution of DNA uptake signal sequences in the
               Haemophilus influenzae Rd genome
     JOURNAL   Science 269 (5223), 538-540 (1995)
      PUBMED   7542802
   REFERENCE   5  (bases 1 to 1830138)
     AUTHORS   Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A.,
               Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F.,
               Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G.G.,
               FitzHugh,W., Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R.,
               Liu,L.I., Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A.,
               Spriggs,T., Hedblom,E., Cotton,M.D., Utterback,T., Hanna,M.C.,
               Nguyen,D.T., Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L.,
               Fuhrmann,J.L., Geoghagen,N.S., Gnehm,C.L., McDonald,L.A.,
               Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C.
     TITLE     Whole-genome random sequencing and assembly of Haemophilus
               influenzae Rd
     JOURNAL   Science 269 (5223), 496-512 (1995)
      PUBMED   7542800
   REFERENCE   6  (bases 1 to 1830138)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   7  (bases 1 to 1830138)
     CONSRTM   NCBI Microbial Genomes Annotation Project
     TITLE     Direct Submission
     JOURNAL   Submitted (25-JUN-2001) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
               reference sequence was derived from L42023.
               COMPLETENESS: full length.
               REFSEQ gene predictions performed by GeneMark 2.4/GeneMark.hmm 2.0
               with comparison to original submitter provided annotation; tRNA
               sequences predicted using tRNAscan-SE 1.21.


Расположение РНК[]

Начало Конец Направление Длина PID Ген COG Комментарий
47152 47241 + 90 16271976 HI10044.1 - 08 Ser tRNA
91546 91621 + 76 16271976 HI0086.2 - 01 Gly tRNA
91628 91701 + 74 16271976 HI0086.1 - 19 Cys tRNA
91729 91815 + 87 16271976 HI0086.3 - 15 Leu tRNA
91866 91941 + 76 16271976 HI0086.4 - 10 Lys tRNA
123431 123559 - 129 16271976 HI0113.2 - 5S ribosomal RNA
123800 126702 - 2903 16271976 HI0113.3 - 23S ribosomal RNA
126969 127044 - 76 16271976 HI1003.4 - 04 Glu tRNA
127172 128720 - 1549 16271976 HI1003.5 - 16S ribosomal RNA
128892 128968 - 77 16271976 HI0113.6 - 03 Pro tRNA
128990 129065 - 76 16271976 HI0113.7 - 09 His tRNA
129092 129168 - 77 16271976 HI0113.8 - 11 Arg tRNA
131584 131660 - 77 16271976 HI0116.1 - 16 Met tRNA
139513 139588 + 76 16271976 HI0123.1 - 01 Gly tRNA
139593 139679 + 87 16271976 HI0123.2 - 15 Leu tRNA
139730 139805 + 76 16271976 HI0123.3 - 10 Lys tRNA
152228 152304 - 77 16271976 HI0136.1 - 06 Asp tRNA
152328 152404 - 77 16271976 HI0136.2 - 06 Asp tRNA
242269 242397 - 129 16271976 HI0220.3 - 5S ribosomal RNA
242637 245539 - 2903 16271976 HI0220.4 - 23S ribosomal RNA
245806 245881 - 76 16271976 HI0220.6 - 04 Glu tRNA
246009 247557 - 1549 16271976 HI0220.5 - 16S ribosomal RNA
288153 288242 - 90 16271976 HI0247.1 - 08 Ser tRNA
307279 307354 - 76 16271976 HI0273.1 - 02 Ala tRNA
309048 309123 + 76 16271976 HI0274.1 - 13 Val tRNA
309167 309242 + 76 16271976 HI0274.2 - 13 Val tRNA
309301 309376 + 76 16271976 HI0274.3 - 13 Val tRNA
309429 309504 + 76 16271976 HI0274.4 - 13 Val tRNA
355348 355437 - 90 16271976 HI0326.1 - 08 Ser tRNA
401796 401871 - 76 16271976 HI0380.1 - 10 Lys tRNA
401895 401970 - 76 16271976 HI0380.2 - 10 Lys tRNA
467760 467842 + 83 16271976 HI0445.1 - 15 Leu tRNA
623821 625369 + 1549 16271976 HI0601.2 - 16S ribosomal RNA
625444 625520 + 77 16271976 HI0601.6 - 14 Ile tRNA
625606 625681 + 76 16271976 HI0601.7 - 02 Ala tRNA
626083 628985 + 2903 16271976 HI0601.3 - 23S ribosomal RNA
629226 629354 + 129 16271976 HI0601.4 - 5S ribosomal RNA
629523 629599 + 77 16271976 HI0601.8 - 06 Asp tRNA
629628 629703 + 76 16271976 HI0601.5 - 20 Trp tRNA
641105 641181 + 77 16271976 HI0609.1 - 03 Pro tRNA
641229 641305 + 77 16271976 HI0609.2 - 11 Arg tRNA
657103 658651 + 1549 16271976 HI0621.2 - 16S ribosomal RNA
658778 658853 + 76 16271976 HI0621.5 - 04 Glu tRNA
659120 662022 + 2903 16271976 HI0621.3 - 23S ribosomal RNA
662263 662391 + 129 16271976 HI0621.4 - 5S ribosomal RNA
671274 671349 + 76 16271976 HI0631.4 - 12 Thr tRNA
671379 671463 + 85 16271976 HI0631.1 - 18 Tyr tRNA
671506 671580 + 75 16271976 HI0631.2 - 01 Gly tRNA
671584 671659 + 76 16271976 HI0631.3 - 12 Thr tRNA
684859 684935 - 77 16271976 HI0642.3 - 11 Arg tRNA
684993 685069 - 77 16271976 HI0642.2 - 11 Arg tRNA
685090 685184 - 95 16271976 HI0642.1 - 08 Ser tRNA
753791 753881 - 91 16271976 HI0707.1 - Sec tRNA
771206 772754 + 1549 16271976 HI0723.1 - 16S ribosomal RNA
772829 772905 + 77 16271976 HI0723.2 - 14 Ile tRNA
772991 773066 + 76 16271976 HI0723.5 - 02 Ala tRNA
773468 776370 + 2903 16271976 HI0723.3 - 23S ribosomal RNA
776611 776739 + 129 16271976 HI0723.4 - 5S ribosomal RNA
825313 825388 + 76 16271976 HI0761.1 - 17 Phe tRNA
825391 825466 + 76 16271976 HI0761.2 - 07 Asn tRNA
906073 906271 + 199 16271976 HI0857.1 - 6S RNA
981435 981511 - 77 16271976 HI0923.1 - 16 Met tRNA
1223883 1223996 + 114 16271976 HI1154.1 - 4.5S RNA
1324965 1325040 + 76 16271976 HI1247.1 - 07 Asn tRNA
1357566 1357931 - 366 16271976 HI1281.2 - tmRNA
1358358 1358434 + 77 16271976 HI1281.1 - 16 Met tRNA
1513211 1513296 - 86 16271976 HI1424.1 - 15 Leu tRNA
1576960 1577041 - 82 16271976 HI1502.1 - Xaa tRNA
1639927 1640003 - 77 16271976 HI1572.1 - 13 Val tRNA
1693872 1693946 - 75 16271976 HI1631.4 - 05 Gln tRNA
1693994 1694068 - 75 16271976 HI1631.3 - 05 Gln tRNA
1694097 1694181 - 85 16271976 HI1631.2 - 15 Leu tRNA
1694187 1694263 - 77 16271976 HI1631.1 - 16 Met tRNA
1746429 1746804 + 376 16271976 HI1677.1 - RNaseP
1787881 1787956 + 76 16271976 HI1715.1 - 01 Gly tRNA
1816484 1816598 - 115 16271976 HI1739.7 - 5S ribosomal RNA
1816839 1819741 - 2903 16271976 HI1739.6 - 23S ribosomal RNA
1820143 1820218 - 76 16271976 HI1739.5 - 02 Ala tRNA
1820304 1820380 - 77 16271976 HI1739.4 - 14 Ile tRNA
1820456 1822004 - 1549 16271976 HI1739.3 - 16S ribosomal RNA
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